Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH6P55285 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH6P55285 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH6P55285 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDH6P55285 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CDH6P55285 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH6P55285 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH6P55285 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDH6P55285 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH6P55285 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH6P55285 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 CICP14-201ENST00000629111 2732 ntBASIC15.89■□□□□ 0.13
CDH6P55285 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 AL513477.1-201ENST00000602865 2407 ntBASIC15.89■□□□□ 0.13
CDH6P55285 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 AL138799.1-201ENST00000448213 1675 ntBASIC15.89■□□□□ 0.13
CDH6P55285 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 SLC7A15P-201ENST00000424028 1363 ntBASIC15.89■□□□□ 0.13
CDH6P55285 LILRP1-201ENST00000444199 1370 ntBASIC15.89■□□□□ 0.13
CDH6P55285 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CDH6P55285 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH6P55285 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 RPL13AP25-201ENST00000484130 612 ntBASIC15.89■□□□□ 0.13
CDH6P55285 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH6P55285 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH6P55285 MIR8072-201ENST00000614241 80 ntBASIC15.89■□□□□ 0.13
CDH6P55285 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 AL360270.3-201ENST00000609118 1348 ntBASIC15.89■□□□□ 0.13
CDH6P55285 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH6P55285 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH6P55285 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH6P55285 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH6P55285 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH6P55285 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH6P55285 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH6P55285 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH6P55285 AL353779.1-201ENST00000434793 351 ntBASIC15.88■□□□□ 0.13
CDH6P55285 AC104596.2-201ENST00000512793 793 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms