Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 ARSEP1-201ENST00000420443 635 ntBASIC16.64■□□□□ 0.25
NCKAP1LP55160 CNN2P8-201ENST00000421872 913 ntBASIC16.64■□□□□ 0.25
NCKAP1LP55160 C2orf27AP3-201ENST00000434123 579 ntBASIC16.64■□□□□ 0.25
NCKAP1LP55160 AC245100.3-201ENST00000441281 285 ntBASIC16.64■□□□□ 0.25
NCKAP1LP55160 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 AL354718.3-201ENST00000616414 581 ntBASIC16.64■□□□□ 0.25
NCKAP1LP55160 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 CR382287.1-201ENST00000623954 586 ntBASIC16.64■□□□□ 0.25
NCKAP1LP55160 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NCKAP1LP55160 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 BOLA2P3-201ENST00000404566 256 ntBASIC16.63■□□□□ 0.25
NCKAP1LP55160 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 ACA64.2-201ENST00000459014 129 ntBASIC16.63■□□□□ 0.25
NCKAP1LP55160 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 RAB43P1-201ENST00000561790 589 ntBASIC16.63■□□□□ 0.25
NCKAP1LP55160 PDIA3P1-201ENST00000471856 1510 ntBASIC16.63■□□□□ 0.25
NCKAP1LP55160 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCKAP1LP55160 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NCKAP1LP55160 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 FAM197Y7-201ENST00000432892 766 ntBASIC16.62■□□□□ 0.25
NCKAP1LP55160 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 AP000812.2-201ENST00000538934 718 ntBASIC16.62■□□□□ 0.25
NCKAP1LP55160 HILS1-202ENST00000545329 423 ntBASIC16.62■□□□□ 0.25
NCKAP1LP55160 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms