Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 EXT2-201ENST00000343631 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 AL353597.3-201ENST00000624365 3745 ntBASIC10.04□□□□□ -0.8
PCP4P48539 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 AC005154.3-201ENST00000419639 1393 ntBASIC10.04□□□□□ -0.8
PCP4P48539 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 PCDHGA9-202ENST00000616887 2568 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
PCP4P48539 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 AC027045.3-201ENST00000635215 2884 ntTSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC10.04□□□□□ -0.8
PCP4P48539 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 TATDN2P2-201ENST00000403590 2226 ntBASIC10.04□□□□□ -0.8
PCP4P48539 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 CWH43-204ENST00000513409 2390 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC10.04□□□□□ -0.8
PCP4P48539 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 AK5-202ENST00000344720 3929 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PCP4P48539 UGT1A6-201ENST00000305139 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PCP4P48539 AC097374.1-202ENST00000582835 3329 ntTSL 2 BASIC10.04□□□□□ -0.8
PCP4P48539 JUP-203ENST00000393931 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 FOSB-201ENST00000353609 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 ASB9-209ENST00000546332 1947 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 EPSTI1-201ENST00000313624 3114 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.03□□□□□ -0.8
PCP4P48539 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 GRIA1-209ENST00000518783 5233 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 AC100788.2-201ENST00000625199 2889 ntBASIC10.03□□□□□ -0.8
PCP4P48539 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 PDE6C-201ENST00000371447 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 AC024257.3-201ENST00000595310 3645 ntBASIC10.03□□□□□ -0.8
PCP4P48539 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 JUP-201ENST00000310706 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 AMMECR1-202ENST00000372057 3380 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
PCP4P48539 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
PCP4P48539 PI4KAP1-204ENST00000612579 1703 ntBASIC10.03□□□□□ -0.8
PCP4P48539 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 AL133325.3-201ENST00000622757 3674 ntBASIC10.03□□□□□ -0.8
PCP4P48539 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 AC079612.1-201ENST00000358775 3700 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 CNDP2-209ENST00000579847 2653 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms