Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 YRDCP1-201ENST00000621419 643 ntBASIC14.99□□□□□ -0.01
CXCL12P48061 Z98259.2-201ENST00000641583 609 ntBASIC14.99□□□□□ -0.01
CXCL12P48061 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 AL662844.4-201ENST00000606367 2838 ntBASIC14.99□□□□□ -0.01
CXCL12P48061 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 CAP2P1-201ENST00000557743 1390 ntBASIC14.98□□□□□ -0.01
CXCL12P48061 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CXCL12P48061 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CXCL12P48061 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CXCL12P48061 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCL12P48061 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 CTBP2P4-201ENST00000513884 920 ntBASIC14.98□□□□□ -0.01
CXCL12P48061 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.98□□□□□ -0.01
CXCL12P48061 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CXCL12P48061 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.98□□□□□ -0.01
CXCL12P48061 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.98□□□□□ -0.01
CXCL12P48061 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 AC138894.2-201ENST00000602838 371 ntBASIC14.98□□□□□ -0.01
CXCL12P48061 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 MIR6720-201ENST00000611664 98 ntBASIC14.98□□□□□ -0.01
CXCL12P48061 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCL12P48061 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 AC092127.1-201ENST00000567093 3455 ntBASIC14.98□□□□□ -0.01
CXCL12P48061 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CXCL12P48061 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL12P48061 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CXCL12P48061 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CXCL12P48061 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 FRMPD2B-201ENST00000431305 1347 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL12P48061 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 RN7SKP230-201ENST00000365642 335 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL12P48061 AL627389.1-201ENST00000413508 1182 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL12P48061 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.97□□□□□ -0.01
CXCL12P48061 AC130709.1-201ENST00000484779 1212 ntBASIC14.97□□□□□ -0.01
CXCL12P48061 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms