Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HMGN1P19-201ENST00000436976 333 ntBASIC15.9■□□□□ 0.14
MMP13P45452 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.9■□□□□ 0.14
MMP13P45452 TPRX2P-201ENST00000535362 881 ntBASIC15.9■□□□□ 0.14
MMP13P45452 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP13P45452 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP13P45452 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 LINC01230-201ENST00000625222 3017 ntBASIC15.9■□□□□ 0.14
MMP13P45452 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP13P45452 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP13P45452 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP13P45452 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.89■□□□□ 0.14
MMP13P45452 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
MMP13P45452 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
MMP13P45452 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 AL928921.2-201ENST00000641325 2442 ntBASIC15.89■□□□□ 0.13
MMP13P45452 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 ACE3P-201ENST00000423435 1973 ntBASIC15.89■□□□□ 0.13
MMP13P45452 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP13P45452 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 FAM207CP-201ENST00000443486 507 ntBASIC15.89■□□□□ 0.13
MMP13P45452 GNAQP1-201ENST00000444815 1067 ntBASIC15.89■□□□□ 0.13
MMP13P45452 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MMP13P45452 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.89■□□□□ 0.13
MMP13P45452 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP13P45452 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP13P45452 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP13P45452 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 WASH3P-207ENST00000560956 1394 ntBASIC15.88■□□□□ 0.13
MMP13P45452 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP13P45452 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 AC010327.5-201ENST00000586923 3061 ntBASIC15.88■□□□□ 0.13
MMP13P45452 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 MIR661-201ENST00000384842 89 ntBASIC15.88■□□□□ 0.13
MMP13P45452 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.88■□□□□ 0.13
MMP13P45452 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP13P45452 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.88■□□□□ 0.13
MMP13P45452 SPTLC1P1-201ENST00000447199 261 ntBASIC15.88■□□□□ 0.13
MMP13P45452 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP13P45452 AC023310.3-201ENST00000557027 670 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms