Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.06■□□□□ 0.64
COL15A1P39059 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
COL15A1P39059 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL15A1P39059 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.06■□□□□ 0.64
COL15A1P39059 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
COL15A1P39059 RN7SKP214-201ENST00000364208 315 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
COL15A1P39059 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.06■□□□□ 0.64
COL15A1P39059 AL353637.1-201ENST00000451571 732 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 HLA-J-204ENST00000495278 958 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 CICP11-201ENST00000434745 2827 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.05■□□□□ 0.64
COL15A1P39059 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL15A1P39059 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 AC090857.1-201ENST00000527400 390 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 RTN3P1-201ENST00000536295 711 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL15A1P39059 AC242376.1-201ENST00000559033 726 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.05■□□□□ 0.64
COL15A1P39059 MIR4754-201ENST00000582477 89 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 RN7SL555P-201ENST00000584742 339 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.05■□□□□ 0.64
COL15A1P39059 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.05■□□□□ 0.64
COL15A1P39059 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.05■□□□□ 0.64
COL15A1P39059 AC012044.1-201ENST00000603431 297 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 AP003419.4-201ENST00000616071 517 ntBASIC19.05■□□□□ 0.64
COL15A1P39059 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.04■□□□□ 0.64
COL15A1P39059 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.04■□□□□ 0.64
COL15A1P39059 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.04■□□□□ 0.64
COL15A1P39059 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
COL15A1P39059 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 AC136621.1-201ENST00000624017 2304 ntBASIC19.04■□□□□ 0.64
COL15A1P39059 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 KLF2P1-201ENST00000447438 1042 ntBASIC19.04■□□□□ 0.64
COL15A1P39059 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.04■□□□□ 0.64
COL15A1P39059 IQSEC3P1-201ENST00000538799 536 ntBASIC19.04■□□□□ 0.64
COL15A1P39059 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.04■□□□□ 0.64
COL15A1P39059 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.04■□□□□ 0.64
COL15A1P39059 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
COL15A1P39059 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.04■□□□□ 0.64
COL15A1P39059 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL15A1P39059 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL15A1P39059 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL15A1P39059 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
COL15A1P39059 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.03■□□□□ 0.64
COL15A1P39059 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.03■□□□□ 0.64
COL15A1P39059 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 AC244394.1-201ENST00000435000 1665 ntBASIC19.03■□□□□ 0.64
COL15A1P39059 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL15A1P39059 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL15A1P39059 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms