Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.37■□□□□ 0.37
COPB2P35606 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPB2P35606 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COPB2P35606 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.36■□□□□ 0.37
COPB2P35606 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COPB2P35606 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 GHSR-202ENST00000427970 912 ntBASIC17.36■□□□□ 0.37
COPB2P35606 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COPB2P35606 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.36■□□□□ 0.37
COPB2P35606 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.36■□□□□ 0.37
COPB2P35606 PRAL-201ENST00000624952 3286 ntBASIC17.36■□□□□ 0.37
COPB2P35606 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.36■□□□□ 0.37
COPB2P35606 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPB2P35606 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COPB2P35606 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COPB2P35606 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.35■□□□□ 0.37
COPB2P35606 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.35■□□□□ 0.37
COPB2P35606 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.35■□□□□ 0.37
COPB2P35606 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 EIF4HP1-201ENST00000453115 687 ntBASIC17.35■□□□□ 0.37
COPB2P35606 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.35■□□□□ 0.37
COPB2P35606 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.35■□□□□ 0.37
COPB2P35606 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.35■□□□□ 0.37
COPB2P35606 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 RHOQP1-201ENST00000555758 579 ntBASIC17.35■□□□□ 0.37
COPB2P35606 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.35■□□□□ 0.37
COPB2P35606 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 AL451050.2-201ENST00000606967 682 ntBASIC17.35■□□□□ 0.37
COPB2P35606 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 AL360270.3-201ENST00000609118 1348 ntBASIC17.35■□□□□ 0.37
COPB2P35606 AP000593.2-201ENST00000542775 1433 ntBASIC17.35■□□□□ 0.37
COPB2P35606 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.35■□□□□ 0.37
COPB2P35606 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COPB2P35606 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
COPB2P35606 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
COPB2P35606 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPB2P35606 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COPB2P35606 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
COPB2P35606 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
COPB2P35606 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
COPB2P35606 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.34■□□□□ 0.37
COPB2P35606 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 AC092506.1-202ENST00000401022 528 ntBASIC17.34■□□□□ 0.37
COPB2P35606 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.34■□□□□ 0.37
COPB2P35606 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.34■□□□□ 0.37
COPB2P35606 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.34■□□□□ 0.37
COPB2P35606 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.34■□□□□ 0.37
COPB2P35606 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPB2P35606 HIST2H2BC-201ENST00000498492 580 ntBASIC17.34■□□□□ 0.37
COPB2P35606 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms