Protein–RNA interactions for Protein: P31941

APOBEC3A, DNA dC->dU-editing enzyme APOBEC-3A, humanhuman

Predicted RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3AP31941 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 DUX4L47-201ENST00000566374 394 ntBASIC12.99□□□□□ -0.33
APOBEC3AP31941 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 CICP11-201ENST00000434745 2827 ntBASIC12.99□□□□□ -0.33
APOBEC3AP31941 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC3AP31941 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC3AP31941 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 REXO1L5P-201ENST00000622260 2098 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 MIR326-201ENST00000362220 95 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 POM121L8P-201ENST00000417732 1281 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 POM121L9P-203ENST00000441984 1285 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 AC022494.1-201ENST00000466044 728 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 AC108725.1-201ENST00000495472 409 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 AC023824.1-201ENST00000562945 2975 ntBASIC12.98□□□□□ -0.33
APOBEC3AP31941 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC3AP31941 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APOBEC3AP31941 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC3AP31941 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
APOBEC3AP31941 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.97□□□□□ -0.33
APOBEC3AP31941 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC3AP31941 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOBEC3AP31941 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC3AP31941 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC3AP31941 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
APOBEC3AP31941 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC3AP31941 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms