Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA5P30532 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA5P30532 AL139008.1-201ENST00000437894 228 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 RPSAP15-201ENST00000448168 861 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA5P30532 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.39■□□□□ 0.53
CHRNA5P30532 DNM1P51-201ENST00000558149 522 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.39■□□□□ 0.53
CHRNA5P30532 FO393412.1-201ENST00000619841 382 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 AC027601.3-201ENST00000622907 509 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA5P30532 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA5P30532 KRT18P9-201ENST00000604826 1300 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 AC090502.4-201ENST00000551714 1386 ntBASIC18.39■□□□□ 0.53
CHRNA5P30532 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA5P30532 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA5P30532 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA5P30532 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA5P30532 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA5P30532 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHRNA5P30532 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNA5P30532 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHRNA5P30532 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.38■□□□□ 0.53
CHRNA5P30532 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHRNA5P30532 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.38■□□□□ 0.53
CHRNA5P30532 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNA5P30532 AC004837.1-201ENST00000446267 564 ntBASIC18.38■□□□□ 0.53
CHRNA5P30532 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.38■□□□□ 0.53
CHRNA5P30532 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.38■□□□□ 0.53
CHRNA5P30532 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.38■□□□□ 0.53
CHRNA5P30532 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.38■□□□□ 0.53
CHRNA5P30532 AC005041.3-201ENST00000606287 649 ntBASIC18.38■□□□□ 0.53
CHRNA5P30532 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.38■□□□□ 0.53
CHRNA5P30532 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.38■□□□□ 0.53
CHRNA5P30532 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.38■□□□□ 0.53
CHRNA5P30532 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA5P30532 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA5P30532 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNA5P30532 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 AL357563.1-201ENST00000404728 395 ntBASIC18.37■□□□□ 0.53
CHRNA5P30532 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 DUTP3-201ENST00000450025 415 ntBASIC18.37■□□□□ 0.53
CHRNA5P30532 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.37■□□□□ 0.53
CHRNA5P30532 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHRNA5P30532 RN7SL596P-201ENST00000582123 288 ntBASIC18.37■□□□□ 0.53
CHRNA5P30532 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNA5P30532 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA5P30532 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms