Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.3□□□□□ -0.12
NR4A1P22736 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 AL592309.1-201ENST00000443127 649 ntBASIC14.3□□□□□ -0.12
NR4A1P22736 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NR4A1P22736 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.3□□□□□ -0.12
NR4A1P22736 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.3□□□□□ -0.12
NR4A1P22736 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.3□□□□□ -0.12
NR4A1P22736 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.3□□□□□ -0.12
NR4A1P22736 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.3□□□□□ -0.12
NR4A1P22736 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 REXO1L1P-202ENST00000608646 1974 ntBASIC14.3□□□□□ -0.12
NR4A1P22736 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.3□□□□□ -0.12
NR4A1P22736 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NR4A1P22736 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 AC018892.3-201ENST00000623986 2499 ntBASIC14.3□□□□□ -0.12
NR4A1P22736 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR4A1P22736 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
NR4A1P22736 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.29□□□□□ -0.12
NR4A1P22736 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 AC127383.1-201ENST00000444697 1800 ntBASIC14.29□□□□□ -0.12
NR4A1P22736 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.29□□□□□ -0.12
NR4A1P22736 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NR4A1P22736 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR4A1P22736 MTHFR-210ENST00000641407 2387 ntBASIC14.29□□□□□ -0.12
NR4A1P22736 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.29□□□□□ -0.12
NR4A1P22736 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.29□□□□□ -0.12
NR4A1P22736 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NR4A1P22736 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A1P22736 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NR4A1P22736 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.28□□□□□ -0.12
NR4A1P22736 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A1P22736 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NR4A1P22736 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A1P22736 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 AC005237.2-201ENST00000434368 219 ntBASIC14.28□□□□□ -0.12
NR4A1P22736 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.28□□□□□ -0.12
NR4A1P22736 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR4A1P22736 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms