Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC009090.5-201ENST00000624886 2285 ntBASIC18.33■□□□□ 0.52
KCNA3P22001 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNA3P22001 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
KCNA3P22001 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.32■□□□□ 0.52
KCNA3P22001 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.32■□□□□ 0.52
KCNA3P22001 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 HLA-DMA-203ENST00000395305 777 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 AQP7P5-201ENST00000428759 1049 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 AQP7P4-201ENST00000447083 1042 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 AQP7P2-201ENST00000453967 1041 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.32■□□□□ 0.52
KCNA3P22001 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.32■□□□□ 0.52
KCNA3P22001 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 NUDT4P2-201ENST00000578341 546 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 BX088702.1-201ENST00000610784 235 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 AQP7P3-201ENST00000624547 1041 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.32■□□□□ 0.52
KCNA3P22001 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 MTHFR-217ENST00000641820 1569 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KCNA3P22001 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA3P22001 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 AC080080.1-201ENST00000625121 2420 ntBASIC18.32■□□□□ 0.52
KCNA3P22001 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA3P22001 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KCNA3P22001 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 PCDHA12-202ENST00000613593 2588 ntBASIC18.31■□□□□ 0.52
KCNA3P22001 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KCNA3P22001 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KCNA3P22001 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KCNA3P22001 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.31■□□□□ 0.52
KCNA3P22001 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.31■□□□□ 0.52
KCNA3P22001 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.31■□□□□ 0.52
KCNA3P22001 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KCNA3P22001 AC114947.1-202ENST00000514136 344 ntBASIC18.31■□□□□ 0.52
KCNA3P22001 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.31■□□□□ 0.52
KCNA3P22001 RN7SL470P-201ENST00000583069 259 ntBASIC18.31■□□□□ 0.52
KCNA3P22001 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KCNA3P22001 AC073592.2-201ENST00000623062 780 ntBASIC18.31■□□□□ 0.52
KCNA3P22001 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.31■□□□□ 0.52
KCNA3P22001 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KCNA3P22001 AL359258.3-201ENST00000622910 2331 ntBASIC18.31■□□□□ 0.52
KCNA3P22001 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KCNA3P22001 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.3■□□□□ 0.52
KCNA3P22001 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KCNA3P22001 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.3■□□□□ 0.52
KCNA3P22001 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KCNA3P22001 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KCNA3P22001 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.3■□□□□ 0.52
KCNA3P22001 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.3■□□□□ 0.52
KCNA3P22001 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KCNA3P22001 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.3■□□□□ 0.52
KCNA3P22001 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KCNA3P22001 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KCNA3P22001 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
KCNA3P22001 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KCNA3P22001 KRT18P36-201ENST00000411618 1276 ntBASIC18.3■□□□□ 0.52
KCNA3P22001 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms