Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.47□□□□□ -0.09
NCK1P16333 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 AC074338.1-201ENST00000416825 156 ntBASIC14.47□□□□□ -0.09
NCK1P16333 AC023274.1-201ENST00000418278 595 ntBASIC14.47□□□□□ -0.09
NCK1P16333 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
NCK1P16333 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.47□□□□□ -0.09
NCK1P16333 KRT18P64-201ENST00000434946 1219 ntBASIC14.47□□□□□ -0.09
NCK1P16333 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 KRT18P3-201ENST00000451602 1288 ntBASIC14.47□□□□□ -0.09
NCK1P16333 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
NCK1P16333 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.47□□□□□ -0.09
NCK1P16333 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
NCK1P16333 AC106730.1-201ENST00000566722 1090 ntBASIC14.47□□□□□ -0.09
NCK1P16333 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 AC015910.1-201ENST00000579400 975 ntBASIC14.47□□□□□ -0.09
NCK1P16333 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.47□□□□□ -0.09
NCK1P16333 AC140113.2-201ENST00000604370 208 ntBASIC14.47□□□□□ -0.09
NCK1P16333 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.46□□□□□ -0.09
NCK1P16333 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NCK1P16333 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 IL9RP2-201ENST00000423948 1312 ntBASIC14.46□□□□□ -0.09
NCK1P16333 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.46□□□□□ -0.09
NCK1P16333 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 FO393414.2-201ENST00000405153 598 ntBASIC14.46□□□□□ -0.09
NCK1P16333 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.46□□□□□ -0.09
NCK1P16333 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.46□□□□□ -0.09
NCK1P16333 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.46□□□□□ -0.09
NCK1P16333 MED15P5-201ENST00000423150 992 ntBASIC14.46□□□□□ -0.09
NCK1P16333 AL353705.2-201ENST00000428243 662 ntBASIC14.46□□□□□ -0.09
NCK1P16333 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.46□□□□□ -0.09
NCK1P16333 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.46□□□□□ -0.09
NCK1P16333 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.46□□□□□ -0.09
NCK1P16333 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.46□□□□□ -0.09
NCK1P16333 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.46□□□□□ -0.09
NCK1P16333 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NCK1P16333 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NCK1P16333 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NCK1P16333 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms