Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.02■□□□□ 0.32
CYP3A4P08684 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CYP3A4P08684 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.02■□□□□ 0.32
CYP3A4P08684 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.02■□□□□ 0.32
CYP3A4P08684 AC007969.1-201ENST00000433675 447 ntBASIC17.02■□□□□ 0.32
CYP3A4P08684 CHMP1AP1-201ENST00000445563 662 ntBASIC17.02■□□□□ 0.32
CYP3A4P08684 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.02■□□□□ 0.32
CYP3A4P08684 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.02■□□□□ 0.32
CYP3A4P08684 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.02■□□□□ 0.32
CYP3A4P08684 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.02■□□□□ 0.32
CYP3A4P08684 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.02■□□□□ 0.32
CYP3A4P08684 AC010328.2-201ENST00000597698 1111 ntBASIC17.02■□□□□ 0.32
CYP3A4P08684 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.02■□□□□ 0.32
CYP3A4P08684 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.02■□□□□ 0.32
CYP3A4P08684 ZACNP1-201ENST00000612259 710 ntBASIC17.02■□□□□ 0.32
CYP3A4P08684 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CYP3A4P08684 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CYP3A4P08684 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CYP3A4P08684 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
CYP3A4P08684 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CYP3A4P08684 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.02■□□□□ 0.31
CYP3A4P08684 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CYP3A4P08684 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CYP3A4P08684 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 AC006058.4-201ENST00000624016 1670 ntBASIC17.01■□□□□ 0.31
CYP3A4P08684 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
CYP3A4P08684 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.01■□□□□ 0.31
CYP3A4P08684 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 AL136309.1-201ENST00000403917 691 ntBASIC17.01■□□□□ 0.31
CYP3A4P08684 AC007274.1-201ENST00000439805 662 ntBASIC17.01■□□□□ 0.31
CYP3A4P08684 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.01■□□□□ 0.31
CYP3A4P08684 HOMER2P2-201ENST00000451621 847 ntBASIC17.01■□□□□ 0.31
CYP3A4P08684 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CYP3A4P08684 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.01■□□□□ 0.31
CYP3A4P08684 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.01■□□□□ 0.31
CYP3A4P08684 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CYP3A4P08684 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.01■□□□□ 0.31
CYP3A4P08684 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.01■□□□□ 0.31
CYP3A4P08684 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CYP3A4P08684 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 LINC00554-201ENST00000564841 3011 ntBASIC17■□□□□ 0.31
CYP3A4P08684 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CYP3A4P08684 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17■□□□□ 0.31
CYP3A4P08684 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17■□□□□ 0.31
CYP3A4P08684 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
CYP3A4P08684 AC009542.2-202ENST00000619004 1067 ntBASIC17■□□□□ 0.31
CYP3A4P08684 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CYP3A4P08684 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CYP3A4P08684 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17■□□□□ 0.31
CYP3A4P08684 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17■□□□□ 0.31
CYP3A4P08684 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CYP3A4P08684 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms