Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.88□□□□□ -0.19
HMGN1P05114 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
HMGN1P05114 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 AL079307.3-201ENST00000556114 283 ntBASIC13.88□□□□□ -0.19
HMGN1P05114 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.88□□□□□ -0.19
HMGN1P05114 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
HMGN1P05114 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.88□□□□□ -0.19
HMGN1P05114 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HMGN1P05114 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HMGN1P05114 ELL2P1-201ENST00000413990 1906 ntBASIC13.88□□□□□ -0.19
HMGN1P05114 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HMGN1P05114 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGN1P05114 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HMGN1P05114 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 MIR940-201ENST00000401276 94 ntBASIC13.87□□□□□ -0.19
HMGN1P05114 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 FAM58DP-201ENST00000428076 619 ntBASIC13.87□□□□□ -0.19
HMGN1P05114 CEND1P1-201ENST00000451006 455 ntBASIC13.87□□□□□ -0.19
HMGN1P05114 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGN1P05114 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.87□□□□□ -0.19
HMGN1P05114 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGN1P05114 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGN1P05114 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 HSPA7-201ENST00000445535 1927 ntBASIC13.87□□□□□ -0.19
HMGN1P05114 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HMGN1P05114 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGN1P05114 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGN1P05114 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
HMGN1P05114 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.87□□□□□ -0.19
HMGN1P05114 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGN1P05114 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGN1P05114 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HMGN1P05114 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGN1P05114 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.86□□□□□ -0.19
HMGN1P05114 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGN1P05114 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.86□□□□□ -0.19
HMGN1P05114 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.86□□□□□ -0.19
HMGN1P05114 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGN1P05114 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGN1P05114 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HMGN1P05114 AL627223.1-201ENST00000416693 442 ntBASIC13.86□□□□□ -0.19
HMGN1P05114 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGN1P05114 AC015922.1-201ENST00000421102 1152 ntBASIC13.86□□□□□ -0.19
HMGN1P05114 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms