Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.36□□□□□ -0.11
PDGFAP04085 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC090142.2-201ENST00000483263 416 ntBASIC14.36□□□□□ -0.11
PDGFAP04085 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC025279.2-201ENST00000569730 653 ntBASIC14.36□□□□□ -0.11
PDGFAP04085 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFAP04085 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFAP04085 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 AC079781.5-202ENST00000641784 3743 ntBASIC14.36□□□□□ -0.11
PDGFAP04085 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 AC104306.2-201ENST00000451877 341 ntBASIC14.35□□□□□ -0.11
PDGFAP04085 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFAP04085 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.35□□□□□ -0.11
PDGFAP04085 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFAP04085 AP001582.1-201ENST00000525856 295 ntBASIC14.35□□□□□ -0.11
PDGFAP04085 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 AL021578.1-201ENST00000613646 709 ntBASIC14.35□□□□□ -0.11
PDGFAP04085 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
PDGFAP04085 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFAP04085 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDGFAP04085 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 AC126755.1-201ENST00000525846 6405 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 AP001282.1-201ENST00000531301 1499 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms