Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 AC106886.4-201ENST00000623557 2502 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 TBC1D3J-201ENST00000620719 1426 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 AL160314.3-201ENST00000556041 767 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 AC021016.3-201ENST00000608367 477 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.76□□□□□ -0.21
SPTA1P02549 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 AL157791.1-201ENST00000553667 1699 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SPTA1P02549 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 AL645937.2-201ENST00000396808 931 ntBASIC13.75□□□□□ -0.21
SPTA1P02549 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 ISCA2P1-201ENST00000425548 448 ntBASIC13.75□□□□□ -0.21
SPTA1P02549 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.75□□□□□ -0.21
SPTA1P02549 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.75□□□□□ -0.21
SPTA1P02549 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.75□□□□□ -0.21
SPTA1P02549 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.75□□□□□ -0.21
SPTA1P02549 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 ALG1L13P-202ENST00000519320 584 ntBASIC13.75□□□□□ -0.21
SPTA1P02549 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.75□□□□□ -0.21
SPTA1P02549 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.75□□□□□ -0.21
SPTA1P02549 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.75□□□□□ -0.21
SPTA1P02549 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 PIN4P1-201ENST00000451079 396 ntBASIC13.75□□□□□ -0.21
SPTA1P02549 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.75□□□□□ -0.21
SPTA1P02549 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SPTA1P02549 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SPTA1P02549 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms