Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 TMCO5B-205ENST00000530020 894 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AL022344.2-201ENST00000568976 968 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.19■□□□□ 0.18
TIMP1P01033 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 FO393412.1-201ENST00000619841 382 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AC138466.4-201ENST00000623965 852 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AC005618.3-201ENST00000624928 458 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.19■□□□□ 0.18
TIMP1P01033 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 AL662844.4-201ENST00000606367 2838 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TIMP1P01033 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.19■□□□□ 0.18
TIMP1P01033 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.18■□□□□ 0.18
TIMP1P01033 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TIMP1P01033 AC079328.2-201ENST00000561241 3354 ntBASIC16.18■□□□□ 0.18
TIMP1P01033 CICP11-201ENST00000434745 2827 ntBASIC16.18■□□□□ 0.18
TIMP1P01033 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 XBP1P1-201ENST00000436573 652 ntBASIC16.18■□□□□ 0.18
TIMP1P01033 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.18■□□□□ 0.18
TIMP1P01033 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.18■□□□□ 0.18
TIMP1P01033 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.18■□□□□ 0.18
TIMP1P01033 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TIMP1P01033 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TIMP1P01033 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TIMP1P01033 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.18■□□□□ 0.18
TIMP1P01033 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.18■□□□□ 0.18
TIMP1P01033 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 AC007326.1-201ENST00000604539 458 ntBASIC16.18■□□□□ 0.18
TIMP1P01033 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TIMP1P01033 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 AP001184.1-201ENST00000637936 376 ntBASIC16.18■□□□□ 0.18
TIMP1P01033 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 KRT8P31-201ENST00000504812 1408 ntBASIC16.18■□□□□ 0.18
TIMP1P01033 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.18■□□□□ 0.18
TIMP1P01033 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TIMP1P01033 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
TIMP1P01033 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 AC090502.4-201ENST00000551714 1386 ntBASIC16.17■□□□□ 0.18
TIMP1P01033 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.17■□□□□ 0.18
TIMP1P01033 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TIMP1P01033 BAK1P1-201ENST00000317045 636 ntBASIC16.17■□□□□ 0.18
TIMP1P01033 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TIMP1P01033 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.17■□□□□ 0.18
TIMP1P01033 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TIMP1P01033 AL139008.1-201ENST00000437894 228 ntBASIC16.17■□□□□ 0.18
TIMP1P01033 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 FTH1P22-201ENST00000456305 520 ntBASIC16.17■□□□□ 0.18
TIMP1P01033 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.17■□□□□ 0.18
TIMP1P01033 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.17■□□□□ 0.18
TIMP1P01033 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.17■□□□□ 0.18
TIMP1P01033 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.17■□□□□ 0.18
TIMP1P01033 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.17■□□□□ 0.18
TIMP1P01033 NUDT4P2-201ENST00000578341 546 ntBASIC16.17■□□□□ 0.18
TIMP1P01033 AC084781.1-201ENST00000613737 656 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms