Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.7■□□□□ 0.1
TOP3BO95985 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.7■□□□□ 0.1
TOP3BO95985 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.7■□□□□ 0.1
TOP3BO95985 AL450472.2-201ENST00000603663 1156 ntBASIC15.7■□□□□ 0.1
TOP3BO95985 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.7■□□□□ 0.1
TOP3BO95985 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TOP3BO95985 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 AJ011931.1-201ENST00000618749 2492 ntBASIC15.7■□□□□ 0.1
TOP3BO95985 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.69■□□□□ 0.1
TOP3BO95985 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.69■□□□□ 0.1
TOP3BO95985 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TOP3BO95985 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 MIR1247-201ENST00000408206 136 ntBASIC15.69■□□□□ 0.1
TOP3BO95985 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.69■□□□□ 0.1
TOP3BO95985 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.69■□□□□ 0.1
TOP3BO95985 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.69■□□□□ 0.1
TOP3BO95985 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.69■□□□□ 0.1
TOP3BO95985 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TOP3BO95985 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.69■□□□□ 0.1
TOP3BO95985 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.69■□□□□ 0.1
TOP3BO95985 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.69■□□□□ 0.1
TOP3BO95985 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 AC097359.3-201ENST00000603982 1210 ntBASIC15.69■□□□□ 0.1
TOP3BO95985 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TOP3BO95985 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.69■□□□□ 0.1
TOP3BO95985 AL033527.5-202ENST00000641632 1098 ntBASIC15.69■□□□□ 0.1
TOP3BO95985 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.69■□□□□ 0.1
TOP3BO95985 CLK3P2-201ENST00000427566 1453 ntBASIC15.69■□□□□ 0.1
TOP3BO95985 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.69■□□□□ 0.1
TOP3BO95985 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.69■□□□□ 0.1
TOP3BO95985 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TOP3BO95985 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
TOP3BO95985 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TOP3BO95985 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOP3BO95985 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
TOP3BO95985 KRT8P37-201ENST00000451609 1420 ntBASIC15.68■□□□□ 0.1
TOP3BO95985 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TOP3BO95985 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.68■□□□□ 0.1
TOP3BO95985 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.68■□□□□ 0.1
TOP3BO95985 GPAA1P2-201ENST00000417923 928 ntBASIC15.68■□□□□ 0.1
TOP3BO95985 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.68■□□□□ 0.1
TOP3BO95985 SLC25A47P1-201ENST00000531577 414 ntBASIC15.68■□□□□ 0.1
TOP3BO95985 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.68■□□□□ 0.1
TOP3BO95985 AC233724.13-201ENST00000598383 410 ntBASIC15.68■□□□□ 0.1
TOP3BO95985 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TOP3BO95985 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.68■□□□□ 0.1
TOP3BO95985 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.68■□□□□ 0.1
TOP3BO95985 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 AC013726.1-201ENST00000563747 2285 ntBASIC15.68■□□□□ 0.1
TOP3BO95985 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms