Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GIMAP3P-201ENST00000495150 836 ntBASIC14.05□□□□□ -0.16
NKX2-2O95096 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 AC009486.1-201ENST00000569860 813 ntBASIC14.05□□□□□ -0.16
NKX2-2O95096 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.05□□□□□ -0.16
NKX2-2O95096 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.05□□□□□ -0.16
NKX2-2O95096 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.05□□□□□ -0.16
NKX2-2O95096 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NKX2-2O95096 EIF3FP3-201ENST00000434851 1086 ntBASIC14.04□□□□□ -0.16
NKX2-2O95096 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 KRT18P25-201ENST00000508931 1278 ntBASIC14.04□□□□□ -0.16
NKX2-2O95096 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.04□□□□□ -0.16
NKX2-2O95096 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 AC106881.1-201ENST00000605849 3329 ntBASIC14.04□□□□□ -0.16
NKX2-2O95096 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-2O95096 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NKX2-2O95096 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NKX2-2O95096 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NKX2-2O95096 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-2O95096 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-2O95096 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NKX2-2O95096 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-2O95096 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NKX2-2O95096 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX2-2O95096 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX2-2O95096 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 AC098614.1-201ENST00000368528 745 ntBASIC14.03□□□□□ -0.16
NKX2-2O95096 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX2-2O95096 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms