Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.94■□□□□ 0.14
BEST1O76090 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.94■□□□□ 0.14
BEST1O76090 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.94■□□□□ 0.14
BEST1O76090 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.94■□□□□ 0.14
BEST1O76090 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.94■□□□□ 0.14
BEST1O76090 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 AL603764.1-201ENST00000636452 321 ntBASIC15.94■□□□□ 0.14
BEST1O76090 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 INE2-201ENST00000630399 1874 ntBASIC15.93■□□□□ 0.14
BEST1O76090 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
BEST1O76090 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.93■□□□□ 0.14
BEST1O76090 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.93■□□□□ 0.14
BEST1O76090 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST1O76090 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.93■□□□□ 0.14
BEST1O76090 MIR6752-201ENST00000618442 71 ntBASIC15.93■□□□□ 0.14
BEST1O76090 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 AC008687.7-202ENST00000637404 953 ntBASIC15.93■□□□□ 0.14
BEST1O76090 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST1O76090 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
BEST1O76090 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST1O76090 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
BEST1O76090 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
BEST1O76090 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
BEST1O76090 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.92■□□□□ 0.14
BEST1O76090 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms