Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL5O76039 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL5O76039 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL5O76039 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDKL5O76039 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKL5O76039 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKL5O76039 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL5O76039 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDKL5O76039 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKL5O76039 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 REXO1L5P-201ENST00000622260 2098 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 AC098850.1-201ENST00000419919 790 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 AP001582.1-201ENST00000525856 295 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.73■□□□□ 0.43
CDKL5O76039 AC140912.1-201ENST00000577171 1054 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.73■□□□□ 0.43
CDKL5O76039 OR2I1P-210ENST00000642037 4691 ntBASIC17.73■□□□□ 0.43
CDKL5O76039 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDKL5O76039 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKL5O76039 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKL5O76039 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CDKL5O76039 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDKL5O76039 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKL5O76039 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKL5O76039 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 AL139094.1-201ENST00000405549 1188 ntBASIC17.72■□□□□ 0.43
CDKL5O76039 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.72■□□□□ 0.43
CDKL5O76039 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 TERF1P3-201ENST00000505638 1227 ntBASIC17.72■□□□□ 0.43
CDKL5O76039 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.72■□□□□ 0.43
CDKL5O76039 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.72■□□□□ 0.43
CDKL5O76039 ENPP7P5-201ENST00000541031 1031 ntBASIC17.72■□□□□ 0.43
CDKL5O76039 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.72■□□□□ 0.43
CDKL5O76039 SPDYE22P-201ENST00000582158 798 ntBASIC17.72■□□□□ 0.43
CDKL5O76039 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDKL5O76039 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL5O76039 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDKL5O76039 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.72■□□□□ 0.43
CDKL5O76039 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CDKL5O76039 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL5O76039 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL5O76039 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL5O76039 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDKL5O76039 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL5O76039 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL5O76039 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms