Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN11O75508 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN11O75508 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN11O75508 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN11O75508 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN11O75508 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN11O75508 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN11O75508 MIR4259-201ENST00000584466 101 ntBASIC15.53■□□□□ 0.08
CLDN11O75508 ECM1P1-201ENST00000604092 1279 ntBASIC15.53■□□□□ 0.08
CLDN11O75508 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN11O75508 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN11O75508 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN11O75508 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN11O75508 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN11O75508 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN11O75508 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN11O75508 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN11O75508 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CLDN11O75508 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN11O75508 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN11O75508 AC104640.1-201ENST00000562617 2109 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN11O75508 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN11O75508 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN11O75508 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN11O75508 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 POM121L8P-201ENST00000417732 1281 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN11O75508 POM121L9P-203ENST00000441984 1285 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 AL590640.2-201ENST00000457038 527 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN11O75508 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN11O75508 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN11O75508 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 AC023310.1-201ENST00000554836 735 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN11O75508 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN11O75508 MIR6752-201ENST00000618442 71 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 AC008687.7-202ENST00000637404 953 ntBASIC15.52■□□□□ 0.08
CLDN11O75508 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN11O75508 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.52■□□□□ 0.07
CLDN11O75508 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.52■□□□□ 0.07
CLDN11O75508 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.52■□□□□ 0.07
CLDN11O75508 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
CLDN11O75508 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLDN11O75508 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLDN11O75508 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.52■□□□□ 0.07
CLDN11O75508 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLDN11O75508 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN11O75508 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN11O75508 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN11O75508 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLDN11O75508 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN11O75508 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CLDN11O75508 AHCYP2-201ENST00000430630 1300 ntBASIC15.51■□□□□ 0.07
CLDN11O75508 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN11O75508 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLDN11O75508 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN11O75508 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN11O75508 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLDN11O75508 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLDN11O75508 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN11O75508 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.51■□□□□ 0.07
CLDN11O75508 AC099336.1-201ENST00000417053 1171 ntBASIC15.51■□□□□ 0.07
CLDN11O75508 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN11O75508 HLA-V-201ENST00000429037 534 ntBASIC15.51■□□□□ 0.07
CLDN11O75508 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.51■□□□□ 0.07
CLDN11O75508 CSF2RBP1-201ENST00000447905 391 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms