Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.85■□□□□ 0.13
LRCH4O75427 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 RNU1-114P-201ENST00000365297 166 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRCH4O75427 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.85■□□□□ 0.13
LRCH4O75427 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.85■□□□□ 0.13
LRCH4O75427 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.85■□□□□ 0.13
LRCH4O75427 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 WASH4P-201ENST00000564273 1246 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 MIR4745-201ENST00000577608 62 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 AC005252.2-201ENST00000624630 1141 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LRCH4O75427 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRCH4O75427 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRCH4O75427 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 AC068587.6-202ENST00000641839 5619 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 AC067930.6-201ENST00000623257 4947 ntBASIC15.85■□□□□ 0.13
LRCH4O75427 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRCH4O75427 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRCH4O75427 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH4O75427 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRCH4O75427 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 AC005912.2-201ENST00000619492 2400 ntBASIC15.84■□□□□ 0.13
LRCH4O75427 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRCH4O75427 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRCH4O75427 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 PIN1P1-201ENST00000412108 996 ntBASIC15.84■□□□□ 0.13
LRCH4O75427 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
LRCH4O75427 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH4O75427 AC190387.1-201ENST00000551683 408 ntBASIC15.84■□□□□ 0.13
LRCH4O75427 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH4O75427 AC133539.2-201ENST00000604757 467 ntBASIC15.84■□□□□ 0.13
LRCH4O75427 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRCH4O75427 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH4O75427 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH4O75427 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LRCH4O75427 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH4O75427 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH4O75427 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.83■□□□□ 0.13
LRCH4O75427 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.83■□□□□ 0.13
LRCH4O75427 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH4O75427 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.83■□□□□ 0.13
LRCH4O75427 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
LRCH4O75427 AL009178.2-201ENST00000597278 2719 ntBASIC15.83■□□□□ 0.13
LRCH4O75427 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.83■□□□□ 0.13
LRCH4O75427 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH4O75427 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH4O75427 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms