Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH16O75309 AC105021.1-202ENST00000570572 669 ntBASIC15.48■□□□□ 0.07
CDH16O75309 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 AL137784.3-201ENST00000623858 2288 ntBASIC15.48■□□□□ 0.07
CDH16O75309 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH16O75309 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 UXT-AS1-201ENST00000590504 1525 ntBASIC15.48■□□□□ 0.07
CDH16O75309 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 BX842568.4-201ENST00000421222 227 ntBASIC15.47■□□□□ 0.07
CDH16O75309 MCCD1P2-201ENST00000423228 335 ntBASIC15.47■□□□□ 0.07
CDH16O75309 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 MIR3687-2-201ENST00000577708 61 ntBASIC15.47■□□□□ 0.07
CDH16O75309 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH16O75309 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 AC025181.2-201ENST00000606994 802 ntBASIC15.47■□□□□ 0.07
CDH16O75309 MIR3687-1-201ENST00000614492 61 ntBASIC15.47■□□□□ 0.07
CDH16O75309 AC055717.3-201ENST00000622967 595 ntBASIC15.47■□□□□ 0.07
CDH16O75309 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDH16O75309 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 MST1P2-201ENST00000457982 2291 ntBASIC15.47■□□□□ 0.07
CDH16O75309 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH16O75309 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH16O75309 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH16O75309 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CDH16O75309 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDH16O75309 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDH16O75309 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH16O75309 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH16O75309 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
CDH16O75309 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
CDH16O75309 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH16O75309 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH16O75309 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CDH16O75309 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH16O75309 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms