Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 AC133539.2-201ENST00000604757 467 ntBASIC13.61□□□□□ -0.23
TRAF3IP2O43734 WFDC1-204ENST00000613603 549 ntBASIC13.61□□□□□ -0.23
TRAF3IP2O43734 PRSS30P-206ENST00000641773 873 ntBASIC13.61□□□□□ -0.23
TRAF3IP2O43734 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 AC013726.1-201ENST00000563747 2285 ntBASIC13.61□□□□□ -0.23
TRAF3IP2O43734 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 LINC01101-201ENST00000622953 1884 ntBASIC13.61□□□□□ -0.23
TRAF3IP2O43734 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 CICP24-201ENST00000605464 2705 ntBASIC13.6□□□□□ -0.23
TRAF3IP2O43734 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 NUS1P3-201ENST00000423502 862 ntBASIC13.6□□□□□ -0.23
TRAF3IP2O43734 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AP001582.1-201ENST00000525856 295 ntBASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC005252.2-201ENST00000624630 1141 ntBASIC13.6□□□□□ -0.23
TRAF3IP2O43734 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 REXO1L5P-201ENST00000622260 2098 ntBASIC13.6□□□□□ -0.23
TRAF3IP2O43734 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAF3IP2O43734 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 AC023824.1-201ENST00000562945 2975 ntBASIC13.59□□□□□ -0.23
TRAF3IP2O43734 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAF3IP2O43734 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms