Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXA2O43364 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXA2O43364 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXA2O43364 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXA2O43364 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXA2O43364 AC016629.1-201ENST00000596579 586 ntBASIC16.18■□□□□ 0.18
HOXA2O43364 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXA2O43364 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXA2O43364 AC097724.1-201ENST00000609581 426 ntBASIC16.18■□□□□ 0.18
HOXA2O43364 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.18■□□□□ 0.18
HOXA2O43364 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
HOXA2O43364 AC068587.8-201ENST00000641239 219 ntBASIC16.18■□□□□ 0.18
HOXA2O43364 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXA2O43364 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
HOXA2O43364 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXA2O43364 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HOXA2O43364 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 AC011840.2-201ENST00000563063 1520 ntBASIC16.18■□□□□ 0.18
HOXA2O43364 AL118508.1-201ENST00000613502 2345 ntBASIC16.18■□□□□ 0.18
HOXA2O43364 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXA2O43364 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXA2O43364 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXA2O43364 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 AC090616.6-203ENST00000579186 1945 ntBASIC16.17■□□□□ 0.18
HOXA2O43364 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXA2O43364 TLE1P1-201ENST00000422965 589 ntBASIC16.17■□□□□ 0.18
HOXA2O43364 PUDPP3-201ENST00000445368 636 ntBASIC16.17■□□□□ 0.18
HOXA2O43364 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXA2O43364 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HOXA2O43364 AC024681.1-201ENST00000521917 487 ntBASIC16.17■□□□□ 0.18
HOXA2O43364 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.17■□□□□ 0.18
HOXA2O43364 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXA2O43364 AL161670.2-201ENST00000557650 1227 ntBASIC16.17■□□□□ 0.18
HOXA2O43364 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 AC090164.2-201ENST00000611487 516 ntBASIC16.17■□□□□ 0.18
HOXA2O43364 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HOXA2O43364 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HOXA2O43364 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXA2O43364 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HOXA2O43364 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXA2O43364 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.16■□□□□ 0.18
HOXA2O43364 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXA2O43364 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA2O43364 PRAL-201ENST00000624952 3286 ntBASIC16.16■□□□□ 0.18
HOXA2O43364 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA2O43364 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA2O43364 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms