Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD2O14647 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD2O14647 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD2O14647 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD2O14647 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.48■□□□□ 0.87
CHD2O14647 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC20.48■□□□□ 0.87
CHD2O14647 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CHD2O14647 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.48■□□□□ 0.87
CHD2O14647 RN7SL357P-201ENST00000581065 298 ntBASIC20.48■□□□□ 0.87
CHD2O14647 AC007250.1-201ENST00000608934 338 ntBASIC20.48■□□□□ 0.87
CHD2O14647 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHD2O14647 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD2O14647 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CHD2O14647 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD2O14647 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHD2O14647 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.48■□□□□ 0.87
CHD2O14647 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD2O14647 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 KRT18P46-201ENST00000435568 1279 ntBASIC20.48■□□□□ 0.87
CHD2O14647 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.48■□□□□ 0.87
CHD2O14647 PEBP1P2-201ENST00000603980 558 ntBASIC20.48■□□□□ 0.87
CHD2O14647 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD2O14647 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD2O14647 NKILA-202ENST00000614771 2598 ntBASIC20.48■□□□□ 0.87
CHD2O14647 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.47■□□□□ 0.87
CHD2O14647 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD2O14647 AC026470.1-201ENST00000478038 846 ntBASIC20.47■□□□□ 0.87
CHD2O14647 AC093826.1-201ENST00000508655 993 ntBASIC20.47■□□□□ 0.87
CHD2O14647 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.47■□□□□ 0.87
CHD2O14647 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD2O14647 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD2O14647 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 CYP2T1P-202ENST00000641596 2535 ntBASIC20.47■□□□□ 0.87
CHD2O14647 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD2O14647 AC087481.3-201ENST00000602886 1894 ntBASIC20.47■□□□□ 0.87
CHD2O14647 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD2O14647 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHD2O14647 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 CTBP2P8-201ENST00000422584 1330 ntBASIC20.46■□□□□ 0.87
CHD2O14647 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.46■□□□□ 0.87
CHD2O14647 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD2O14647 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CHD2O14647 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD2O14647 AC124068.2-201ENST00000569473 1109 ntBASIC20.46■□□□□ 0.87
CHD2O14647 TRMT112P3-201ENST00000580149 358 ntBASIC20.46■□□□□ 0.87
CHD2O14647 AC018695.6-201ENST00000614011 534 ntBASIC20.46■□□□□ 0.87
CHD2O14647 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD2O14647 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 AP002353.1-201ENST00000528257 1599 ntBASIC20.46■□□□□ 0.87
CHD2O14647 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CHD2O14647 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD2O14647 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 KHSRPP1-201ENST00000427983 1768 ntBASIC20.46■□□□□ 0.87
CHD2O14647 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD2O14647 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CHD2O14647 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD2O14647 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD2O14647 AP005264.6-204ENST00000588436 719 ntBASIC20.46■□□□□ 0.87
CHD2O14647 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD2O14647 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms