Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AL441883.1-201ENST00000566170 1045 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL136038.4-201ENST00000603606 1261 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC012306.2-201ENST00000609350 630 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC020765.3-201ENST00000613051 740 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.33□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.33□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FAM8A6P-201ENST00000407496 1135 ntBASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 KRT89P-201ENST00000620027 1478 ntBASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 U82695.1-201ENST00000635752 1889 ntBASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 YBX1P2-201ENST00000489612 999 ntBASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LINC01023-201ENST00000606054 436 ntBASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC139887.4-201ENST00000607877 719 ntBASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms