Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC025181.2-201ENST00000606994 802 ntBASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 MIR7706-201ENST00000613747 67 ntBASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 AC027612.1-201ENST00000445234 2395 ntBASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRDV1A0A1B0GX56 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 AC090505.1-201ENST00000430515 1834 ntBASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 TFAMP1-201ENST00000412727 736 ntBASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 AC116407.3-201ENST00000623905 1129 ntBASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 AC018665.1-201ENST00000622927 1362 ntBASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRDV1A0A1B0GX56 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 AC099521.3-201ENST00000624251 2938 ntBASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 AGGF1P1-201ENST00000509500 2073 ntBASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRDV1A0A1B0GX56 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms