Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 AC007787.1-201ENST00000588095 1583 ntBASIC14.49□□□□□ -0.09
AP4S1Q9Y587 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 CRYGEP-201ENST00000412192 528 ntBASIC14.49□□□□□ -0.09
AP4S1Q9Y587 HNRNPDP1-201ENST00000439535 754 ntBASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 REXO1L4P-201ENST00000605109 1937 ntBASIC14.49□□□□□ -0.09
AP4S1Q9Y587 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.49□□□□□ -0.09
AP4S1Q9Y587 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 AL356585.2-201ENST00000625078 2396 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 PPT1-213ENST00000641319 2388 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 RPS2P28-201ENST00000314255 741 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 HCG4B-203ENST00000450128 991 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 AC093458.2-201ENST00000623150 629 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 AC027612.1-201ENST00000445234 2395 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 DMBT1P1-203ENST00000636837 4628 ntBASIC14.48□□□□□ -0.09
AP4S1Q9Y587 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP4S1Q9Y587 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
AP4S1Q9Y587 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms