Protein–RNA interactions for Protein: Q9Y448

KNSTRN, Small kinetochore-associated protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRNQ9Y448 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 MIR658-201ENST00000385210 100 ntBASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 AC026434.2-201ENST00000506094 1078 ntBASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 MIR4259-201ENST00000584466 101 ntBASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 ZBED1P1-201ENST00000502364 1930 ntBASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.76■□□□□ 0.91
KNSTRNQ9Y448 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AGAP7P-201ENST00000582299 2062 ntBASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AGAP14-201ENST00000624701 2060 ntBASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 RNA5SP486-201ENST00000515961 83 ntBASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AP005482.1-201ENST00000563722 1273 ntBASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 ENPP7P14-201ENST00000621765 1040 ntBASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AC144831.1-201ENST00000573312 2656 ntBASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 MECR-202ENST00000373791 2416 ntTSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.75■□□□□ 0.91
KNSTRNQ9Y448 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 AL590640.2-201ENST00000457038 527 ntBASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 AC078819.1-201ENST00000547454 765 ntBASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 AC012085.1-201ENST00000548270 765 ntBASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
KNSTRNQ9Y448 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KNSTRNQ9Y448 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms