Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AL589702.1-201ENST00000641229 1509 ntBASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AL139385.1-201ENST00000611744 3272 ntBASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 TCAF1P1-201ENST00000414990 2232 ntBASIC17.62■□□□□ 0.41
R3HCC1Q9Y3T6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 CNN2P2-201ENST00000443536 909 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 CNN2P3-201ENST00000450201 906 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 RARRES2P9-201ENST00000565168 469 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 MIR6080-201ENST00000617359 66 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 AL136317.3-201ENST00000618497 906 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 AP001059.3-201ENST00000619053 235 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 AP3S2-216ENST00000617003 1561 ntBASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.61■□□□□ 0.41
R3HCC1Q9Y3T6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 FAM220BP-201ENST00000377689 816 ntBASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AL353705.2-201ENST00000428243 662 ntBASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 FAM86GP-201ENST00000448322 971 ntBASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AC026150.2-201ENST00000564693 1156 ntBASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AC003101.2-201ENST00000612557 442 ntBASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms