Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLED1-202ENST00000512051 380 ntBASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 AC010336.2-201ENST00000564226 506 ntBASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 AF228730.6-201ENST00000641497 218 ntBASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 AC084121.3-201ENST00000641716 218 ntBASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 WASH3P-207ENST00000560956 1394 ntBASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RHBDD3Q9Y3P4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CICP11-201ENST00000434745 2827 ntBASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 TREML5P-201ENST00000421694 576 ntBASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AC097493.3-201ENST00000509725 367 ntBASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.44□□□□□ -0.26
RHBDD3Q9Y3P4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.43□□□□□ -0.26
RHBDD3Q9Y3P4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms