Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TPRKBQ9Y3C4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 AC027612.1-201ENST00000445234 2395 ntBASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 TMPOP1-202ENST00000424642 1267 ntBASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 AC073648.2-201ENST00000510116 352 ntBASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 CLEC4GP1-201ENST00000596555 870 ntBASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 AP000550.4-202ENST00000639755 178 ntBASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.99□□□□□ -0.17
TPRKBQ9Y3C4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 AC099521.3-201ENST00000624251 2938 ntBASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.98□□□□□ -0.17
TPRKBQ9Y3C4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms