Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.64■□□□□ 0.9
NINLQ9Y2I6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NINLQ9Y2I6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
NINLQ9Y2I6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 BX284668.4-201ENST00000453917 508 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AC005730.2-201ENST00000564549 1184 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 MIR4783-201ENST00000580343 82 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 MIR7845-201ENST00000618396 99 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AC023090.2-201ENST00000625182 2110 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AL359258.3-201ENST00000622910 2331 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AC092978.1-202ENST00000637590 1327 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 AC009093.2-202ENST00000620513 2079 ntBASIC20.64■□□□□ 0.89
NINLQ9Y2I6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NINLQ9Y2I6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.63■□□□□ 0.89
NINLQ9Y2I6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.63■□□□□ 0.89
NINLQ9Y2I6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.62■□□□□ 0.89
NINLQ9Y2I6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 SERPINA13P-202ENST00000478994 924 ntBASIC20.62■□□□□ 0.89
NINLQ9Y2I6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 AC008825.2-201ENST00000603374 718 ntBASIC20.62■□□□□ 0.89
NINLQ9Y2I6 AC007663.3-201ENST00000609632 465 ntBASIC20.62■□□□□ 0.89
NINLQ9Y2I6 AL023803.2-201ENST00000620080 638 ntBASIC20.62■□□□□ 0.89
NINLQ9Y2I6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 SHC1P1-201ENST00000425230 1745 ntBASIC20.62■□□□□ 0.89
NINLQ9Y2I6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NINLQ9Y2I6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 REXO1L2P-201ENST00000425429 2069 ntBASIC20.61■□□□□ 0.89
NINLQ9Y2I6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 RPL17P11-201ENST00000417593 544 ntBASIC20.61■□□□□ 0.89
NINLQ9Y2I6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 EIF4HP1-201ENST00000453115 687 ntBASIC20.61■□□□□ 0.89
NINLQ9Y2I6 AC131206.1-201ENST00000538078 1211 ntBASIC20.61■□□□□ 0.89
NINLQ9Y2I6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NINLQ9Y2I6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 291.9 ms