Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 AC005912.2-201ENST00000619492 2400 ntBASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 IGHV3-42-201ENST00000520410 361 ntBASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 AL079307.3-201ENST00000556114 283 ntBASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CICP11-201ENST00000434745 2827 ntBASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ACE3P-201ENST00000423435 1973 ntBASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.76□□□□□ -0.37
LIN7CQ9NUP9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 CICP14-201ENST00000629111 2732 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 FO393414.2-201ENST00000405153 598 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 TREML5P-201ENST00000421694 576 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 REXO1L2P-201ENST00000425429 2069 ntBASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.75□□□□□ -0.37
LIN7CQ9NUP9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms