Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AC006504.5-208ENST00000588784 2401 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 CETN4P-206ENST00000642099 2168 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AC004461.1-201ENST00000412461 403 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AC093520.2-201ENST00000561830 333 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 MIR4453-201ENST00000584019 89 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AC025048.3-201ENST00000590609 569 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AL589739.1-201ENST00000607720 493 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AC005702.4-201ENST00000618393 416 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 LINC00628-201ENST00000628516 1289 ntBASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CDC42SE2Q9NRR3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 LILRP1-201ENST00000444199 1370 ntBASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 AL121723.1-201ENST00000445194 1519 ntBASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
CDC42SE2Q9NRR3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms