Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 AC006449.6-201ENST00000612330 2296 ntBASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 HIST2H2BB-201ENST00000449108 381 ntBASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 AC103988.2-201ENST00000561804 725 ntBASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 OR10B1P-201ENST00000601666 907 ntBASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 AC004923.1-202ENST00000642106 209 ntBASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
UBE2OQ9C0C9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 AC104073.2-201ENST00000453737 312 ntBASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 RPL18P13-201ENST00000478088 569 ntBASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 AL157792.1-201ENST00000488281 530 ntBASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 AC100850.1-201ENST00000506768 649 ntBASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2OQ9C0C9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms