Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 ACKR1-201ENST00000368121 1240 ntBASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AC079776.1-201ENST00000401540 1152 ntBASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AC012441.1-201ENST00000446669 685 ntBASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AC093433.1-201ENST00000458048 571 ntBASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 AL512343.1-201ENST00000605837 169 ntBASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 BCRP2-202ENST00000447763 634 ntBASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 AC004066.1-201ENST00000502488 802 ntBASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 BCRP6-201ENST00000510112 632 ntBASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 BCRP7-201ENST00000511549 544 ntBASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 AP005019.2-201ENST00000615104 511 ntBASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP3Q9BWW4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 TNRC18P2-201ENST00000417666 2714 ntBASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP3Q9BWW4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms