Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 TIMM8BP1-201ENST00000452384 211 ntBASIC14.91□□□□□ -0.02
EBF4Q9BQW3 TPT1P11-201ENST00000458482 498 ntBASIC14.91□□□□□ -0.02
EBF4Q9BQW3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 SLED1-202ENST00000512051 380 ntBASIC14.91□□□□□ -0.02
EBF4Q9BQW3 RNA5SP416-201ENST00000516838 111 ntBASIC14.91□□□□□ -0.02
EBF4Q9BQW3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 AL645728.2-202ENST00000641679 227 ntBASIC14.91□□□□□ -0.02
EBF4Q9BQW3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EBF4Q9BQW3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AL353705.2-201ENST00000428243 662 ntBASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 CICP20-201ENST00000443330 2801 ntBASIC14.9□□□□□ -0.02
EBF4Q9BQW3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
EBF4Q9BQW3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AL133267.1-201ENST00000398220 340 ntBASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.89□□□□□ -0.03
EBF4Q9BQW3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms