Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GRK6P1-201ENST00000400595 1711 ntBASIC14.27□□□□□ -0.12
TM9SF2Q99805 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM9SF2Q99805 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM9SF2Q99805 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TM9SF2Q99805 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TM9SF2Q99805 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TM9SF2Q99805 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TM9SF2Q99805 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TM9SF2Q99805 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.27□□□□□ -0.12
TM9SF2Q99805 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.27□□□□□ -0.12
TM9SF2Q99805 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 SPDYE19P-201ENST00000338590 713 ntBASIC14.27□□□□□ -0.13
TM9SF2Q99805 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 AC140912.1-201ENST00000577171 1054 ntBASIC14.27□□□□□ -0.13
TM9SF2Q99805 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 AC074044.1-201ENST00000609673 707 ntBASIC14.27□□□□□ -0.13
TM9SF2Q99805 AL035252.4-201ENST00000624174 288 ntBASIC14.27□□□□□ -0.13
TM9SF2Q99805 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 AL109936.8-201ENST00000641772 604 ntBASIC14.27□□□□□ -0.13
TM9SF2Q99805 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.13
TM9SF2Q99805 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TM9SF2Q99805 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 TIMM17BP1-201ENST00000545713 516 ntBASIC14.26□□□□□ -0.13
TM9SF2Q99805 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 CR383656.12-201ENST00000549567 513 ntBASIC14.26□□□□□ -0.13
TM9SF2Q99805 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 TP53TG3HP-202ENST00000569755 579 ntBASIC14.26□□□□□ -0.13
TM9SF2Q99805 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 SRD5A3P1-201ENST00000603021 949 ntBASIC14.26□□□□□ -0.13
TM9SF2Q99805 AC004461.2-201ENST00000629517 803 ntBASIC14.26□□□□□ -0.13
TM9SF2Q99805 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF2Q99805 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TM9SF2Q99805 AL390755.1-201ENST00000623716 2027 ntBASIC14.25□□□□□ -0.13
TM9SF2Q99805 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF2Q99805 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms