Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.64■□□□□ 0.09
CDCA3Q99618 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 AC006122.1-201ENST00000493323 440 ntBASIC15.64■□□□□ 0.09
CDCA3Q99618 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CDCA3Q99618 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.64■□□□□ 0.09
CDCA3Q99618 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.64■□□□□ 0.09
CDCA3Q99618 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 MIR3188-201ENST00000583494 85 ntBASIC15.64■□□□□ 0.09
CDCA3Q99618 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.64■□□□□ 0.09
CDCA3Q99618 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 MIR6842-201ENST00000612539 65 ntBASIC15.64■□□□□ 0.09
CDCA3Q99618 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDCA3Q99618 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 REXO1L4P-201ENST00000605109 1937 ntBASIC15.64■□□□□ 0.09
CDCA3Q99618 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCA3Q99618 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.64■□□□□ 0.09
CDCA3Q99618 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDCA3Q99618 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 AC025271.4-201ENST00000621477 1726 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDCA3Q99618 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDCA3Q99618 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.63■□□□□ 0.09
CDCA3Q99618 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 CICP12-201ENST00000455801 843 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 CHCHD2P9-201ENST00000461726 456 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CDCA3Q99618 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.63■□□□□ 0.09
CDCA3Q99618 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.63■□□□□ 0.09
CDCA3Q99618 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.63■□□□□ 0.09
CDCA3Q99618 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 AC133540.1-201ENST00000620845 1019 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 AC007718.1-201ENST00000621078 280 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 AC009084.3-201ENST00000623356 437 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.63■□□□□ 0.09
CDCA3Q99618 AC144522.1-201ENST00000625111 1658 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDCA3Q99618 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDCA3Q99618 AC006449.5-201ENST00000610658 2098 ntBASIC15.63■□□□□ 0.09
CDCA3Q99618 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CDCA3Q99618 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 AL603832.2-201ENST00000566195 2125 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 AC092127.1-201ENST00000567093 3455 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CDCA3Q99618 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 AL627389.1-201ENST00000413508 1182 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.62■□□□□ 0.09
CDCA3Q99618 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDCA3Q99618 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.62■□□□□ 0.09
CDCA3Q99618 AP000358.1-201ENST00000456260 156 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.62■□□□□ 0.09
CDCA3Q99618 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.62■□□□□ 0.09
CDCA3Q99618 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.62■□□□□ 0.09
CDCA3Q99618 AC093752.3-201ENST00000567343 901 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 PHBP15-201ENST00000574228 665 ntBASIC15.62■□□□□ 0.09
CDCA3Q99618 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
CDCA3Q99618 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.62■□□□□ 0.09
CDCA3Q99618 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.62■□□□□ 0.09
CDCA3Q99618 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms