Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 NUS1P3-201ENST00000423502 862 ntBASIC21.15■□□□□ 0.98
CCDC7Q96M83 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 AC103810.3-201ENST00000583567 96 ntBASIC21.15■□□□□ 0.98
CCDC7Q96M83 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 LINC02228-204ENST00000642115 2962 ntBASIC21.15■□□□□ 0.98
CCDC7Q96M83 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC7Q96M83 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC7Q96M83 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 ACTBP8-201ENST00000403258 1108 ntBASIC21.14■□□□□ 0.98
CCDC7Q96M83 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AC022137.2-201ENST00000503482 481 ntBASIC21.14■□□□□ 0.98
CCDC7Q96M83 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.14■□□□□ 0.98
CCDC7Q96M83 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC7Q96M83 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.14■□□□□ 0.98
CCDC7Q96M83 AC068587.10-201ENST00000641210 219 ntBASIC21.14■□□□□ 0.98
CCDC7Q96M83 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC7Q96M83 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC7Q96M83 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC7Q96M83 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CCDC7Q96M83 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC7Q96M83 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC7Q96M83 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC7Q96M83 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CCDC7Q96M83 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms