Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 IGHEP1-201ENST00000521393 651 ntBASIC16.43■□□□□ 0.22
LRCH3Q96II8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AL450472.2-201ENST00000603663 1156 ntBASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC005632.3-201ENST00000605544 308 ntBASIC16.43■□□□□ 0.22
LRCH3Q96II8 AL162426.1-201ENST00000624141 743 ntBASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AC007950.2-201ENST00000615045 2347 ntBASIC16.43■□□□□ 0.22
LRCH3Q96II8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 AC011270.2-201ENST00000624293 2550 ntBASIC16.42■□□□□ 0.22
LRCH3Q96II8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 CYP2T1P-202ENST00000641596 2535 ntBASIC16.42■□□□□ 0.22
LRCH3Q96II8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 POU5F1P2-201ENST00000521750 823 ntBASIC16.42■□□□□ 0.22
LRCH3Q96II8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 AC026803.1-201ENST00000569130 274 ntBASIC16.42■□□□□ 0.22
LRCH3Q96II8 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 AC060766.1-201ENST00000590824 627 ntBASIC16.42■□□□□ 0.22
LRCH3Q96II8 AC097359.3-201ENST00000603982 1210 ntBASIC16.42■□□□□ 0.22
LRCH3Q96II8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH3Q96II8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH3Q96II8 PAUPAR-201ENST00000630360 2965 ntBASIC16.41■□□□□ 0.22
LRCH3Q96II8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH3Q96II8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH3Q96II8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH3Q96II8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRCH3Q96II8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRCH3Q96II8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH3Q96II8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH3Q96II8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH3Q96II8 KRT17P4-201ENST00000429445 819 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms