Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 API5-211ENST00000534695 560 ntTSL 5 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 AL132655.2-201ENST00000596276 594 ntBASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 AC133539.2-201ENST00000604757 467 ntBASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 MTHFR-210ENST00000641407 2387 ntBASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDLIM5Q96HC4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC007191.1-201ENST00000623179 2995 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 MIR661-201ENST00000384842 89 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 MYCLP2-201ENST00000449268 967 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC022616.1-201ENST00000518688 554 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 SPCS2P1-201ENST00000561636 679 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 RN7SL204P-201ENST00000582831 262 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 LINC02560-201ENST00000596379 459 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC004233.3-201ENST00000607794 1269 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AP005019.2-201ENST00000615104 511 ntBASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM5Q96HC4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms