Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS3Q969F9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS3Q969F9 AP001582.1-201ENST00000525856 295 ntBASIC16.91■□□□□ 0.3
HPS3Q969F9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS3Q969F9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS3Q969F9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.91■□□□□ 0.3
HPS3Q969F9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS3Q969F9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HPS3Q969F9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HPS3Q969F9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS3Q969F9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS3Q969F9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HPS3Q969F9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HPS3Q969F9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HPS3Q969F9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 KRT8P22-201ENST00000562317 1415 ntBASIC16.9■□□□□ 0.3
HPS3Q969F9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 DGCR5-201ENST00000399539 862 ntBASIC16.9■□□□□ 0.3
HPS3Q969F9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
HPS3Q969F9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS3Q969F9 WFDC1-204ENST00000613603 549 ntBASIC16.9■□□□□ 0.3
HPS3Q969F9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HPS3Q969F9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS3Q969F9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS3Q969F9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HPS3Q969F9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HPS3Q969F9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HPS3Q969F9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HPS3Q969F9 AC015656.1-201ENST00000624209 3578 ntBASIC16.89■□□□□ 0.29
HPS3Q969F9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 PIN1P1-201ENST00000412108 996 ntBASIC16.89■□□□□ 0.29
HPS3Q969F9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS3Q969F9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS3Q969F9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.89■□□□□ 0.29
HPS3Q969F9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.89■□□□□ 0.29
HPS3Q969F9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.89■□□□□ 0.29
HPS3Q969F9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.89■□□□□ 0.29
HPS3Q969F9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.89■□□□□ 0.29
HPS3Q969F9 TMEM261P1-201ENST00000604899 340 ntBASIC16.89■□□□□ 0.29
HPS3Q969F9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HPS3Q969F9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS3Q969F9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.89■□□□□ 0.29
HPS3Q969F9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.89■□□□□ 0.29
HPS3Q969F9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms