Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 SLC22A20-204ENST00000530038 1673 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
HPS1Q92902 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.14□□□□□ -0.15
HPS1Q92902 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 HSPA7-201ENST00000445535 1927 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HPS1Q92902 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 PMS2P4-201ENST00000412466 1052 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.14□□□□□ -0.15
HPS1Q92902 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.14□□□□□ -0.15
HPS1Q92902 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.14□□□□□ -0.15
HPS1Q92902 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 RN7SL589P-201ENST00000481268 310 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.14□□□□□ -0.15
HPS1Q92902 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 AC021097.1-201ENST00000607902 574 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 AC026120.1-201ENST00000611536 926 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HPS1Q92902 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HPS1Q92902 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 AL731571.1-201ENST00000617058 5428 ntBASIC14.14□□□□□ -0.15
HPS1Q92902 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HPS1Q92902 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.14□□□□□ -0.15
HPS1Q92902 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.14□□□□□ -0.15
HPS1Q92902 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HPS1Q92902 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.13□□□□□ -0.15
HPS1Q92902 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.13□□□□□ -0.15
HPS1Q92902 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.13□□□□□ -0.15
HPS1Q92902 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.13□□□□□ -0.15
HPS1Q92902 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.13□□□□□ -0.15
HPS1Q92902 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.13□□□□□ -0.15
HPS1Q92902 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.13□□□□□ -0.15
HPS1Q92902 AC092364.2-202ENST00000597012 1073 ntBASIC14.13□□□□□ -0.15
HPS1Q92902 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HPS1Q92902 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 AL031055.1-201ENST00000606362 631 ntBASIC14.13□□□□□ -0.15
HPS1Q92902 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.13□□□□□ -0.15
HPS1Q92902 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 AC106028.4-201ENST00000614509 607 ntBASIC14.13□□□□□ -0.15
HPS1Q92902 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.13□□□□□ -0.15
HPS1Q92902 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HPS1Q92902 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms