Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.63■□□□□ 0.57
RPGRQ92834 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RPGRQ92834 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RPGRQ92834 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.63■□□□□ 0.57
RPGRQ92834 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RPGRQ92834 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPGRQ92834 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
RPGRQ92834 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RPGRQ92834 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPGRQ92834 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RPGRQ92834 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RPGRQ92834 SNORD3B-2-202ENST00000571722 791 ntBASIC18.62■□□□□ 0.57
RPGRQ92834 AP000346.4-201ENST00000614827 381 ntBASIC18.62■□□□□ 0.57
RPGRQ92834 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RPGRQ92834 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPGRQ92834 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.62■□□□□ 0.57
RPGRQ92834 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.62■□□□□ 0.57
RPGRQ92834 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
RPGRQ92834 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
RPGRQ92834 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.62■□□□□ 0.57
RPGRQ92834 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.62■□□□□ 0.57
RPGRQ92834 PRAL-201ENST00000624952 3286 ntBASIC18.62■□□□□ 0.57
RPGRQ92834 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RPGRQ92834 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPGRQ92834 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.61■□□□□ 0.57
RPGRQ92834 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.61■□□□□ 0.57
RPGRQ92834 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RPGRQ92834 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 ISCA2P1-201ENST00000425548 448 ntBASIC18.61■□□□□ 0.57
RPGRQ92834 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.61■□□□□ 0.57
RPGRQ92834 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.61■□□□□ 0.57
RPGRQ92834 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.61■□□□□ 0.57
RPGRQ92834 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.61■□□□□ 0.57
RPGRQ92834 AL132994.2-201ENST00000603120 687 ntBASIC18.61■□□□□ 0.57
RPGRQ92834 AC012044.1-201ENST00000603431 297 ntBASIC18.61■□□□□ 0.57
RPGRQ92834 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.61■□□□□ 0.57
RPGRQ92834 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPGRQ92834 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.61■□□□□ 0.57
RPGRQ92834 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RPGRQ92834 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPGRQ92834 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.6■□□□□ 0.57
RPGRQ92834 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPGRQ92834 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.6■□□□□ 0.57
RPGRQ92834 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RPGRQ92834 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms