Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 AC007787.1-201ENST00000588095 1583 ntBASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 LILRP1-201ENST00000444199 1370 ntBASIC15.87■□□□□ 0.13
ATG4AQ8WYN0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AC092580.3-201ENST00000430932 139 ntBASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 KLF2P3-201ENST00000451977 1087 ntBASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ATG4AQ8WYN0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AC005840.4-201ENST00000541242 2494 ntBASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AC069120.2-201ENST00000524091 540 ntBASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 SAMD11P1-201ENST00000571429 661 ntBASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AC000095.1-201ENST00000603208 874 ntBASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AC027601.5-201ENST00000624065 2482 ntBASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATG4AQ8WYN0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATG4AQ8WYN0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATG4AQ8WYN0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATG4AQ8WYN0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.84■□□□□ 0.13
ATG4AQ8WYN0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATG4AQ8WYN0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATG4AQ8WYN0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms