Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 RPSAP43-201ENST00000402237 625 ntBASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 AC055811.4-201ENST00000624039 1754 ntBASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC44A1Q8WWI5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 AL512356.2-201ENST00000546955 174 ntBASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC44A1Q8WWI5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 OR2I1P-209ENST00000641730 5365 ntBASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 HLA-V-204ENST00000476601 1289 ntBASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AC010336.2-201ENST00000564226 506 ntBASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 MIR3687-2-201ENST00000577708 61 ntBASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 MIR3687-1-201ENST00000614492 61 ntBASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 AC126755.1-201ENST00000525846 6405 ntBASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC44A1Q8WWI5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms